BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030E10SP1|AL429240
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1509 1480 0.0
3x_Contig741 398 e-111
>3x_Contig1509
Length = 8584
Score = 1480 bits (743), Expect = 0.0
Identities = 772/783 (98%), Gaps = 2/783 (0%)
Strand = Plus / Plus
Query: 204 ggscgggccaaagaaggtttctaagcragtsaacaagagccgtacc-agaacaggtgccg 262
|| ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||
Sbjct: 1 ggccgggccaaagaaggtttctaagcaagtcaacaagagccgtacccagaacaggtgccg 60
Query: 263 gtccttctagagttccaaagaaggctgcttctgctgctgccctagtgccagctttgctaa 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtccttctagagttccaaagaaggctgcttctgctgctgccctagtgccagctttgctaa 120
Query: 323 gagctcctatttctactagagttaatgtcgagggtttgccaagagacattaaccaagacg 382
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 gagctcctatttctactagagttaatgtcgagggtt-gccaagagacattaaccaagacg 179
Query: 383 ctgttaaagtatgtyccattttagccatggcctcttagtaggttcttttctaatgaaaag 442
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctgttaaagtatgtcccattttagccatggcctcttagtaggttcttttctaatgaaaag 239
Query: 443 gactgtbgagatgctactgtactgattgcgaaaacaaatcggatcaaactgcaataagac 502
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gactgtcgagatgctactgtactgattgcgaaaacaaatcggatcaaactgcaataagac 299
Query: 503 ttgcggttaatttaagtttacaacggatatatcctgtggaattccatccttatgtttact 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttgcggttaatttaagtttacaacggatatatcctgtggaattccatccttatgtttact 359
Query: 563 atacgatcatacattcccgtgtatttgattaagaagaaacggtcgatcgatacctttttt 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atacgatcatacattcccgtgtatttgattaagaagaaacggtcgatcgatacctttttt 419
Query: 623 gaggtctgatattgatgtgtgaattatttatttcagagttagtttttattgagctaatga 682
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 420 gaggtctgatattgatgtgtgaataatttatttcagagttagtttttattgagctaatga 479
Query: 683 aatataacaaaacgaaattagctatccaattggctgggtttcgcttttcagcaagccttc 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aatataacaaaacgaaattagctatccaattggctgggtttcgcttttcagcaagccttc 539
Query: 743 ctttgtgatttctttccgtttttctcctctaagttgacagaacttttcatcaaaattatg 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctttgtgatttctttccgtttttctcctctaagttgacagaacttttcatcaaaattatg 599
Query: 803 cactgaacttcgtttatttacgacattttatttgatggagaaacggtagtaaatcacgat 862
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 600 cactgaacttcgtttatttacgacattttatttgatggagaaacggtagtgaatcacgat 659
Query: 863 tgggaaatgccgaaaagatgaagtatatctattttttctcgtcatatcttctattcttgt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tgggaaatgccgaaaagatgaagtatatctattttttctcgtcatatcttctattcttgt 719
Query: 923 gacattatgtgtcactggagtgtctgttaccatttattacatttggsaatgcatctattt 982
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 720 gacattatgtgtcactggagtttctgttaccatttattacatttggcaatgcatctattt 779
Query: 983 ttt 985
|||
Sbjct: 780 ttt 782
>3x_Contig741
Length = 3021
Score = 398 bits (200), Expect = e-111
Identities = 234/244 (95%), Gaps = 3/244 (1%)
Strand = Plus / Minus
Query: 1 atttttttccctttttccatgaaagttgttcttcaaatttctctttgtttctacttcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atttttttccctttttccatgaaagttgttcttcaaatttctctttgtttctacttcata 183
Query: 61 aggcaagcaactttataagttatttccttcgaatcagctacccatcagattctttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aggcaagcaactttataagttatttccttcgaatcagctacccatcagattctttttttt 123
Query: 121 acactctcataagcaatgtctgctctagatcaatcattagatgaaattattggctcagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 122 acactctcataagcaatgtctgctctagatcaatcattagatgaaattatt-gctcagcc 64
Query: 181 aagcatgccagargaaacaacaaggscgggccaaagaaggtttctaagcragtsaacaag 240
|||||||||||| || |||||||| | |||||||||| |||| ||||| ||| ||||||
Sbjct: 63 aagcatgccagaagattcaacaaggcc-ggccaaagaa-gtttttaagcaagtcaacaag 6
Query: 241 agcc 244
||||
Sbjct: 5 agcc 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8198
Number of Sequences: 1807
Number of extensions: 8198
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 2
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)